TAP PHD in Ceratodon purpureus (Transcriptome)

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Dicranidae; Pseudoditrichales; Ditrichaceae; Ceratodon

Protein source: Szövényi et al. (2015) Mol Ecol Res 15:203-15


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

PHD
Alfin-like
Homeobox
zf-TAZ
ARID
zf-MIZ
zf-CCCH
HMG_box
DDT
Myb_DNA-binding
JmjC
JmjN
SWIB

(Domain names are clickable)



List of proteins (33)

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m240lflr_isotig00494_22_rc
m240lflr_isotig00495_19_rc
m240lflr_isotig00496_19_rc
m240lflr_isotig00497_18_rc
m240lflr_isotig00499_18_rc
m240lflr_isotig05325_7_rc
m240lflr_isotig07054_5
m240lflr_isotig07055_5
m240lflr_isotig07056_5
m240lflr_isotig08368_15
m240lflr_isotig08751_27_rc
m240lflr_isotig08752_27_rc
m240lflr_isotig08855_13_rc
m240lflr_isotig08856_12_rc
m240lflr_isotig13517_34_rc
m240lflr_isotig13545_24_rc
m240lflr_isotig13641_2
m240lflr_isotig13834_3
m240lflr_isotig13853_6
m240lflr_isotig14023_11_rc
m240lflr_isotig14209_12_rc
m240lflr_isotig14302_2
m240lflr_isotig14379_12_rc
m240lflr_isotig14548_11_rc
m240lflr_isotig14570_11_rc
m240lflr_isotig14698_14_rc
m240lflr_isotig14930_10_rc
m240lflr_isotig15947_9_rc
m240lflr_isotig16447_1
m240lflr_isotig17122_2
m240lflr_isotig20439_1
m240lflr_isotig20787_2_rc
m240lflr_isotig21931_4_rc
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum